Navigate through the different steps using the tabs available at the top of the dashboard.
Why phytase placeholder.
Placeholder describing theoretical design. 1. Conserving residues involved in activity based on proximity to ligand and evolutionary conservation. 2. Maintain these residues and generate remainder of protein sequence. 3. Structural prediction and overlay with natural phytase. 4. Comparison of key enzymatic characteristics; confidence predictions, pH activity, solubility.
The 3D visualization of E. coli phytase (PDB: 1DKP) is shown bound to its natural substrate, inositol hexakisphosphate (IHP), highlighting amino acid residues nearby the ligand.
This dashboard presents a visual representation of the Phytase (1DKP) crystal structure bound to it’s phytate ligand (IHP).
The scatter plot represents the alpha-carbon and ligand atom locations in 3-dimensional space.
| Property | Value |
|---|---|
| Total Residues | 310 |
| Proximal Residues (≤7Å) | 39 |
| Ligand Atoms | 36 |
| Proximity Threshold | 7.0 Å |
Placeholder for comparing the predicted protein to the original 1DKP structure.